Module 02: Reading the Spectrum
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The Spectrum
An RGA (Residual Gas Analyzer) ionizes residual gas molecules and sorts them by mass-to-charge ratio (m/z, in AMU). The result is a bar chart of partial pressures. A clean, well-baked system is dominated by H₂ (mass 2) with traces of CO (28) and CO₂ (44). Water (18) and hydrocarbons (39–100) indicate the system needs more bake time or has a contamination source.
Species Explorer
Click a species to highlight its cracking pattern — the set of mass fragments produced when the molecule is ionized. The parent ion is the strongest peak; lighter fragments appear at characteristic ratios.

Cracking Pattern

Click a species to see its cracking pattern and fragment ratios.
The M28 Problem
Mass 28 is the most ambiguous peak in any RGA spectrum. It can be N₂ (air leak), CO (outgassing), or even C₂H₄ (ethylene). Misidentifying it leads to wrong diagnoses. Here is how to tell them apart:

N₂ — Air Leak

If M32 (O₂) is present alongside M28, check the ratio. Atmospheric air has N₂/O₂ ≈ 3.7 by partial pressure. If you see this ratio, it is an air leak. Argon (M40) at ~1% of M28 confirms it.

Look for: M28 + M32 + M40  |  N₂/O₂ ≈ 3.7

CO — Outgassing

CO often appears with CO₂ (M44) because both originate from oxide-layer reduction and beam-induced desorption. If M44 is correlated with M28 but M32 is absent, the M28 is predominantly CO.

Look for: M28 + M44, no M32  |  CO/CO₂ correlation

C₂H₄ — Ethylene

Ethylene and other light hydrocarbons produce M28 but also have fragments at M27, M26, M25. If you see a cluster of peaks in the 25–27 range alongside M28, suspect hydrocarbon contamination.

Look for: M25 + M26 + M27 cluster near M28
Quick Rules — 5 Spectrum Reflexes
  1. M2 dominant, nothing else: System is clean. H₂ is the endgame species — it permeates through stainless steel and cannot be fully removed. This is a well-baked system.
  2. M18 > M2: Water-dominated spectrum. The system needs more bake time or has a virtual leak (trapped volume releasing water).
  3. M28 strong + M32 present: Air leak. Check all flanges, valves, and feedthroughs. Use helium to locate the leak.
  4. Forest at M39–100: Hydrocarbon contamination. Identify the source: pump oil backstreaming, dirty components, solvents, or O-ring outgassing.
  5. M40/M2 ratio ≈ 0.012: Atmospheric argon detected relative to hydrogen. This confirms an air leak even when M32 is ambiguous due to overlap with methanol (M32) or O₂ from a getter.
Build Your Own Spectrum
Toggle gas sources on and off to build a composite spectrum. Watch how real-world contamination scenarios look on an RGA. The diagnostic engine analyzes your spectrum in real time.
Complete Cracking Patterns
Relative intensities (%) for major fragments at 70 eV electron impact ionization. Parent ion = 100%.
SpeciesFormulaParentMajor fragments (m/z: intensity %)Sensitivity
WaterH₂O1817: 25%, 16: 2%, 1: 5%1.00
NitrogenN₂2814: 7%, 29: 0.7%1.00
OxygenO₂3216: 11%, 34: 0.4%0.86
Carbon monoxideCO2812: 4.6%, 16: 1.7%, 29: 1.1%1.05
Carbon dioxideCO₂4428: 11%, 16: 8.5%, 12: 6%, 45: 1.2%1.40
ArgonAr4020: 22%, 36: 0.3%1.20
HydrogenH₂21: 3%0.44
MethaneCH₄1615: 85%, 14: 16%, 13: 7%, 12: 3%1.60
EthaneC₂H₆2827: 33%, 26: 23%, 29: 22%, 30: 26%, 25: 5%2.60
Pump oil (DC-704)C₆H₅(CH₃)SiO7876: 30%, 77: 25%, 51: 18%, 50: 12%, 39: 8%
Sensitivity & quantification:
Ptrue = Pindicated / Srel
where Srel is the relative sensitivity factor (N₂ = 1.00). Heavier molecules generally have higher sensitivity due to more ionization cross-section.
References
[1] NIST Chemistry WebBook, Mass Spectra, webbook.nist.gov.
[2] J.F. O'Hanlon, A User's Guide to Vacuum Technology, 3rd ed., Wiley, 2003 — Ch. 6: Residual Gas Analyzers.
[3] J.H. Batey, "Quadrupole Gas Analyzers," Vacuum 37 (1987) 659–668.
[4] K. Jousten (ed.), Handbook of Vacuum Technology, 2nd ed., Wiley-VCH, 2016 — Ch. 12: Partial Pressure Measurement.